You always get more money selling individually because if you bundle cards up, chances are people only need a portion of the bundle and will only be willing to pay a portion of what the whole bundle is worth. This is also better for the hobby because you get the right cards to the right people.
My strategy would be:
1. Contact other Bogut collectors and do them a sweet deal on whatever they need
2. After that, sell individually, down to base, for a good while so a wide audience is reached
3. Sell in small lots to get interest from small time resellers or people shopping for trade baits
4. Sell whatever remains in one big lot to big time resellers